Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb4Q91XZ6 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Gm44069-201ENSMUST00000204898 506 ntBASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Gm18473-201ENSMUST00000220543 868 ntBASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb4Q91XZ6 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Gm27701-201ENSMUST00000184498 110 ntBASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Gm28911-201ENSMUST00000188837 117 ntBASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Gm16372-201ENSMUST00000073088 450 ntBASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.71□□□□□ -0.37
Pcdhb4Q91XZ6 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms