Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC15.03■□□□□ -0
Pcdhb5Q91XZ5 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm13315-201ENSMUST00000120376 991 ntBASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm14832-201ENSMUST00000121289 322 ntBASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm5070-201ENSMUST00000177599 862 ntBASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm28882-201ENSMUST00000185504 314 ntBASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhb5Q91XZ5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhb5Q91XZ5 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Gm13296-201ENSMUST00000117854 997 ntBASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Rprl1-202ENSMUST00000198476 238 ntBASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Gm45224-201ENSMUST00000208203 414 ntBASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Gm39404-201ENSMUST00000216350 313 ntBASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhb5Q91XZ5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms