Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Gm14760-201ENSMUST00000121831 999 ntBASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Gm24526-201ENSMUST00000082921 158 ntBASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb6Q91XZ4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Gm12384-201ENSMUST00000119228 919 ntBASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Gm5745-201ENSMUST00000183748 313 ntBASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Gm40466-201ENSMUST00000212174 422 ntBASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms