Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
H1fooQ8VIK3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Gm8805-201ENSMUST00000117848 313 ntBASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Proscos-202ENSMUST00000178990 666 ntBASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
H1fooQ8VIK3 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
H1fooQ8VIK3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
H1fooQ8VIK3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
H1fooQ8VIK3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
H1fooQ8VIK3 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
H1fooQ8VIK3 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Gm8213-201ENSMUST00000118191 441 ntBASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Gm13123-201ENSMUST00000122173 492 ntBASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Gm12138-201ENSMUST00000122180 951 ntBASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Gm37922-201ENSMUST00000195596 455 ntBASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
H1fooQ8VIK3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm20633-201ENSMUST00000176742 2831 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms