Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Snord83b-201ENSMUST00000104546 94 ntBASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Gm4984-201ENSMUST00000115987 360 ntBASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
HnrnpuQ8VEK3 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
HnrnpuQ8VEK3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.14
HnrnpuQ8VEK3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Gm29127-201ENSMUST00000188304 517 ntBASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HnrnpuQ8VEK3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Gm12363-201ENSMUST00000122250 668 ntBASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Gm7029-201ENSMUST00000173226 450 ntBASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Gm7063-201ENSMUST00000186840 981 ntBASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Gm43818-201ENSMUST00000200605 466 ntBASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HnrnpuQ8VEK3 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.87■□□□□ 0.13
HnrnpuQ8VEK3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HnrnpuQ8VEK3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HnrnpuQ8VEK3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HnrnpuQ8VEK3 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HnrnpuQ8VEK3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms