Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC8.05□□□□□ -1.12
Cystm1Q8K353 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Cystm1Q8K353 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Cystm1Q8K353 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Cystm1Q8K353 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm43045-201ENSMUST00000198725 2095 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm44942-201ENSMUST00000096093 2072 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm4204-201ENSMUST00000110798 1231 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm46209-201ENSMUST00000217912 553 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 AC132467.2-202ENSMUST00000227726 559 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm37542-201ENSMUST00000192563 2832 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Cystm1Q8K353 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Gm37324-201ENSMUST00000194500 4504 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC8.04□□□□□ -1.12
Cystm1Q8K353 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Cystm1Q8K353 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 AC159195.1-201ENSMUST00000225867 2086 ntBASIC8.03□□□□□ -1.12
Cystm1Q8K353 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Gm45684-201ENSMUST00000210244 1571 ntBASIC8.03□□□□□ -1.12
Cystm1Q8K353 Tmed9-203ENSMUST00000224741 1450 ntBASIC8.03□□□□□ -1.12
Cystm1Q8K353 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Gm12585-201ENSMUST00000117307 290 ntBASIC8.03□□□□□ -1.12
Cystm1Q8K353 Gm15487-201ENSMUST00000122373 465 ntBASIC8.03□□□□□ -1.12
Cystm1Q8K353 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Cystm1Q8K353 Gm38294-201ENSMUST00000192831 381 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms