Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Smc5Q8CG46 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Gm7488-201ENSMUST00000117148 684 ntBASIC15.77■□□□□ 0.12
Smc5Q8CG46 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Gm15823-201ENSMUST00000064305 670 ntBASIC15.77■□□□□ 0.12
Smc5Q8CG46 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smc5Q8CG46 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smc5Q8CG46 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 AC126262.1-201ENSMUST00000221802 1904 ntBASIC15.76■□□□□ 0.11
Smc5Q8CG46 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.76■□□□□ 0.11
Smc5Q8CG46 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Retreg1-206ENSMUST00000228306 1430 ntBASIC15.76■□□□□ 0.11
Smc5Q8CG46 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smc5Q8CG46 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Map1b-203ENSMUST00000223725 2669 ntBASIC15.75■□□□□ 0.11
Smc5Q8CG46 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Gm16479-201ENSMUST00000121706 932 ntBASIC15.75■□□□□ 0.11
Smc5Q8CG46 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Gm37042-201ENSMUST00000193816 581 ntBASIC15.75■□□□□ 0.11
Smc5Q8CG46 Gm8099-201ENSMUST00000200510 742 ntBASIC15.75■□□□□ 0.11
Smc5Q8CG46 Gm8227-201ENSMUST00000223306 571 ntBASIC15.75■□□□□ 0.11
Smc5Q8CG46 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Smc5Q8CG46 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms