Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc87Q8CDL9 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Gm15806-201ENSMUST00000120696 955 ntBASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Gm15429-201ENSMUST00000151268 798 ntBASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Gm26315-201ENSMUST00000083890 321 ntBASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc87Q8CDL9 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Gm15371-201ENSMUST00000117057 784 ntBASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Gm9002-201ENSMUST00000178437 499 ntBASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Gm42550-201ENSMUST00000201553 960 ntBASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccdc87Q8CDL9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc87Q8CDL9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms