Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm6007-201ENSMUST00000208170 823 ntBASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Cts7-204ENSMUST00000225321 1257 ntBASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.87□□□□□ -0.03
Alx1Q8C8B0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Alx1Q8C8B0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Gm25214-201ENSMUST00000104573 129 ntBASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Gm38266-201ENSMUST00000194931 421 ntBASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Gm6334-201ENSMUST00000207083 228 ntBASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Gm39404-201ENSMUST00000216350 313 ntBASIC14.86□□□□□ -0.03
Alx1Q8C8B0 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Alx1Q8C8B0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Gm25043-201ENSMUST00000158604 212 ntBASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Gm2991-201ENSMUST00000173338 480 ntBASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Gm9022-201ENSMUST00000182482 992 ntBASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Alx1Q8C8B0 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms