Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Gm12058-201ENSMUST00000118614 437 ntBASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Col6a6Q8C6K9 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gm7600-201ENSMUST00000209657 785 ntBASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gm17827-201ENSMUST00000211825 742 ntBASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Col6a6Q8C6K9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Col6a6Q8C6K9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms