Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.72□□□□□ -0.69
Tsen54Q8C2A2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Mir698-201ENSMUST00000102164 109 ntBASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Gm4804-201ENSMUST00000182234 999 ntBASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Gm5425-201ENSMUST00000214125 459 ntBASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 AC166997.1-201ENSMUST00000225122 572 ntBASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Tsen54Q8C2A2 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tsen54Q8C2A2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Syt7-204ENSMUST00000223586 1344 ntBASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Gm45841-201ENSMUST00000207700 164 ntBASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Gm20445-201ENSMUST00000061905 565 ntBASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tsen54Q8C2A2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms