Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm17150-201ENSMUST00000165577 381 ntBASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm17208-201ENSMUST00000168388 535 ntBASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm29127-201ENSMUST00000188304 517 ntBASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sh3rf3Q8C120 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Snord83b-201ENSMUST00000104546 94 ntBASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Gm26185-201ENSMUST00000157692 266 ntBASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Gm37042-201ENSMUST00000193816 581 ntBASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sh3rf3Q8C120 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Gm12291-201ENSMUST00000121627 311 ntBASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Gm2231-201ENSMUST00000125661 612 ntBASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sh3rf3Q8C120 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms