Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SprnQ8BWU1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.28□□□□□ -0.6
SprnQ8BWU1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm42599-201ENSMUST00000201308 469 ntBASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm45384-201ENSMUST00000210451 277 ntBASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm15823-201ENSMUST00000064305 670 ntBASIC11.28□□□□□ -0.6
SprnQ8BWU1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.28□□□□□ -0.6
SprnQ8BWU1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.28□□□□□ -0.6
SprnQ8BWU1 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SprnQ8BWU1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SprnQ8BWU1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
SprnQ8BWU1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.27□□□□□ -0.61
SprnQ8BWU1 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Gm12291-201ENSMUST00000121627 311 ntBASIC11.27□□□□□ -0.61
SprnQ8BWU1 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Mir6392-201ENSMUST00000184924 108 ntBASIC11.27□□□□□ -0.61
SprnQ8BWU1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SprnQ8BWU1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.27□□□□□ -0.61
SprnQ8BWU1 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.27□□□□□ -0.61
SprnQ8BWU1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SprnQ8BWU1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Gm18624-201ENSMUST00000220966 658 ntBASIC11.27□□□□□ -0.61
SprnQ8BWU1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SprnQ8BWU1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms