Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cdk5rap1Q8BTW8 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cdk5rap1Q8BTW8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm27320-201ENSMUST00000184892 109 ntBASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm22058-201ENSMUST00000083393 310 ntBASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.15□□□□□ -0.46
Cdk5rap1Q8BTW8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk5rap1Q8BTW8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk5rap1Q8BTW8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk5rap1Q8BTW8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk5rap1Q8BTW8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Cdk5rap1Q8BTW8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
Cdk5rap1Q8BTW8 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Daam2-202ENSMUST00000224595 1926 ntBASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.14□□□□□ -0.47
Cdk5rap1Q8BTW8 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms