Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm9358-201ENSMUST00000183067 927 ntBASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Gm2965-201ENSMUST00000198365 343 ntBASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Gm17831-201ENSMUST00000205579 900 ntBASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 AC158355.1-201ENSMUST00000215895 1705 ntBASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col16a1Q8BLX7 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm11246-201ENSMUST00000120880 345 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm12164-201ENSMUST00000121695 551 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 AC151275.1-201ENSMUST00000224870 585 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Mir8115-201ENSMUST00000184992 119 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Ighv1-48-201ENSMUST00000191795 294 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm5852-201ENSMUST00000194119 1021 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm5542-201ENSMUST00000195485 1089 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm4157-201ENSMUST00000211647 679 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Col16a1Q8BLX7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Gm7722-201ENSMUST00000120646 741 ntBASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col16a1Q8BLX7 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Gm5847-201ENSMUST00000178959 1595 ntBASIC16.41■□□□□ 0.22
Col16a1Q8BLX7 Gm24891-201ENSMUST00000104391 136 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms