Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Itm2b-204ENSMUST00000228637 783 ntBASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rnf38Q8BI21 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Mir7654-201ENSMUST00000185082 70 ntBASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Gm44397-201ENSMUST00000195950 113 ntBASIC12.35□□□□□ -0.43
Rnf38Q8BI21 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rnf38Q8BI21 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 AC129336.1-201ENSMUST00000220224 2277 ntBASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rnf38Q8BI21 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Rnf38Q8BI21 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rnf38Q8BI21 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms