Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Slc5a7Q8BGY9 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Gm12485-201ENSMUST00000119641 291 ntBASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Gm43703-201ENSMUST00000200523 763 ntBASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Gm35960-201ENSMUST00000202712 767 ntBASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc5a7Q8BGY9 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm13813-201ENSMUST00000120998 787 ntBASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm44335-201ENSMUST00000196879 141 ntBASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm44297-201ENSMUST00000198304 141 ntBASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm44346-201ENSMUST00000198851 141 ntBASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm17795-201ENSMUST00000214505 757 ntBASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc5a7Q8BGY9 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms