Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim50Q810I2 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
Trim50Q810I2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.46□□□□□ -0.41
Trim50Q810I2 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Trim50Q810I2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim50Q810I2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.46□□□□□ -0.41
Trim50Q810I2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim50Q810I2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim50Q810I2 Gm17208-201ENSMUST00000168388 535 ntBASIC12.46□□□□□ -0.41
Trim50Q810I2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.46□□□□□ -0.41
Trim50Q810I2 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Gm27682-201ENSMUST00000183930 110 ntBASIC12.46□□□□□ -0.41
Trim50Q810I2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.46□□□□□ -0.41
Trim50Q810I2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trim50Q810I2 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.46□□□□□ -0.41
Trim50Q810I2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim50Q810I2 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.46□□□□□ -0.42
Trim50Q810I2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Trim50Q810I2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Trim50Q810I2 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim50Q810I2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim50Q810I2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim50Q810I2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim50Q810I2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim50Q810I2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Trim50Q810I2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trim50Q810I2 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.46□□□□□ -0.42
Trim50Q810I2 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trim50Q810I2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.45□□□□□ -0.42
Trim50Q810I2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Snord83b-201ENSMUST00000104546 94 ntBASIC12.45□□□□□ -0.42
Trim50Q810I2 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Gm15824-201ENSMUST00000119516 955 ntBASIC12.45□□□□□ -0.42
Trim50Q810I2 Gm12363-201ENSMUST00000122250 668 ntBASIC12.45□□□□□ -0.42
Trim50Q810I2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim50Q810I2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Gm26927-201ENSMUST00000182385 965 ntBASIC12.45□□□□□ -0.42
Trim50Q810I2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.45□□□□□ -0.42
Trim50Q810I2 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim50Q810I2 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.45□□□□□ -0.42
Trim50Q810I2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.45□□□□□ -0.42
Trim50Q810I2 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim50Q810I2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim50Q810I2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim50Q810I2 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms