Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm26956-201ENSMUST00000182176 986 ntBASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Gm27243-201ENSMUST00000183964 521 ntBASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Gm21769-201ENSMUST00000211922 111 ntBASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Gm37744-201ENSMUST00000194616 1590 ntBASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pcdh19Q80TF3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdh19Q80TF3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm20482-202ENSMUST00000174729 825 ntBASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gm22058-201ENSMUST00000083393 310 ntBASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Mir339-201ENSMUST00000083659 96 ntBASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdh19Q80TF3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms