Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Gm13316-201ENSMUST00000140537 691 ntBASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Gm5904-201ENSMUST00000210286 865 ntBASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nudcd1Q6PIP5 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nudcd1Q6PIP5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nudcd1Q6PIP5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nudcd1Q6PIP5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Gm13492-201ENSMUST00000119772 665 ntBASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nudcd1Q6PIP5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Gm4857-201ENSMUST00000192718 785 ntBASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.88□□□□□ -0.35
Nudcd1Q6PIP5 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms