Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps54Q5SPW0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Gm2991-201ENSMUST00000173338 480 ntBASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Morn2-202ENSMUST00000227729 656 ntBASIC15.31■□□□□ 0.04
Vps54Q5SPW0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC15.31■□□□□ 0.04
Vps54Q5SPW0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Vps54Q5SPW0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Gm12241-201ENSMUST00000118330 726 ntBASIC15.3■□□□□ 0.04
Vps54Q5SPW0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Gm45865-201ENSMUST00000211815 945 ntBASIC15.3■□□□□ 0.04
Vps54Q5SPW0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vps54Q5SPW0 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vps54Q5SPW0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms