Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc88aQ5SNZ0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm14921-201ENSMUST00000118643 908 ntBASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm45433-201ENSMUST00000209386 247 ntBASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc88aQ5SNZ0 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm13611-201ENSMUST00000118269 318 ntBASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Rprl1-202ENSMUST00000198476 238 ntBASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Gm10752-201ENSMUST00000218348 729 ntBASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 AC132901.1-201ENSMUST00000224345 508 ntBASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 AC154849.4-201ENSMUST00000224868 365 ntBASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc88aQ5SNZ0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc88aQ5SNZ0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms