Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Gm15236-201ENSMUST00000117309 379 ntBASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Gm8018-201ENSMUST00000173536 789 ntBASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Gm44044-201ENSMUST00000205178 1089 ntBASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
Rc3h1Q4VGL6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gm25668-201ENSMUST00000157700 129 ntBASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Rc3h1Q4VGL6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.74□□□□□ -0.05
Rc3h1Q4VGL6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms