Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Gm25043-201ENSMUST00000158604 212 ntBASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.92□□□□□ -0.02
Prpf38aQ4FK66 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Prpf38aQ4FK66 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Gm11930-201ENSMUST00000117788 190 ntBASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Gm9176-201ENSMUST00000219955 1120 ntBASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Prpf38aQ4FK66 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gm24830-201ENSMUST00000102024 166 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gm5863-201ENSMUST00000121760 1008 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gm15547-201ENSMUST00000122152 333 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gm25890-201ENSMUST00000177643 165 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gm22614-201ENSMUST00000178300 165 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gm37201-201ENSMUST00000191845 523 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 AC113031.8-201ENSMUST00000227856 631 ntBASIC14.89□□□□□ -0.03
Prpf38aQ4FK66 Gm22042-201ENSMUST00000082989 165 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms