Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.03□□□□□ -0.48
Mmp25Q3U435 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Mir1938-201ENSMUST00000158746 100 ntBASIC12.03□□□□□ -0.48
Mmp25Q3U435 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Gm16296-201ENSMUST00000159905 325 ntBASIC12.03□□□□□ -0.48
Mmp25Q3U435 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.03□□□□□ -0.48
Mmp25Q3U435 Gm43118-201ENSMUST00000199149 775 ntBASIC12.03□□□□□ -0.48
Mmp25Q3U435 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.03□□□□□ -0.48
Mmp25Q3U435 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.03□□□□□ -0.48
Mmp25Q3U435 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp25Q3U435 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Mmp25Q3U435 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp25Q3U435 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp25Q3U435 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp25Q3U435 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp25Q3U435 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp25Q3U435 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
Mmp25Q3U435 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp25Q3U435 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Mmp25Q3U435 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Gm11793-201ENSMUST00000120433 981 ntBASIC12.02□□□□□ -0.49
Mmp25Q3U435 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.02□□□□□ -0.49
Mmp25Q3U435 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.02□□□□□ -0.49
Mmp25Q3U435 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.02□□□□□ -0.49
Mmp25Q3U435 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Gm9823-201ENSMUST00000051212 327 ntBASIC12.02□□□□□ -0.49
Mmp25Q3U435 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.02□□□□□ -0.49
Mmp25Q3U435 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Mmp25Q3U435 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Mmp25Q3U435 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms