Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gm2594-201ENSMUST00000214774 742 ntBASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gm7787-201ENSMUST00000216858 688 ntBASIC10.47□□□□□ -0.73
Trim63Q38HM4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.47□□□□□ -0.73
Trim63Q38HM4 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Trim63Q38HM4 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Gm45089-201ENSMUST00000208082 2040 ntBASIC10.46□□□□□ -0.73
Trim63Q38HM4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Gm10013-201ENSMUST00000106074 672 ntBASIC10.46□□□□□ -0.73
Trim63Q38HM4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Gm11950-201ENSMUST00000121615 838 ntBASIC10.46□□□□□ -0.73
Trim63Q38HM4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Trim63Q38HM4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.46□□□□□ -0.73
Trim63Q38HM4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Trim63Q38HM4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC10.46□□□□□ -0.73
Trim63Q38HM4 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.46□□□□□ -0.74
Trim63Q38HM4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Trim63Q38HM4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.46□□□□□ -0.74
Trim63Q38HM4 Gm45132-201ENSMUST00000207234 2542 ntBASIC10.46□□□□□ -0.74
Trim63Q38HM4 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim63Q38HM4 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Trim63Q38HM4 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Rgr-203ENSMUST00000225070 4704 ntBASIC10.45□□□□□ -0.74
Trim63Q38HM4 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Trim63Q38HM4 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms