Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm18304-201ENSMUST00000189162 546 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 Gm44967-201ENSMUST00000207047 631 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Gm10312-201ENSMUST00000078515 489 ntBASIC12.26□□□□□ -0.45
Hoxc4Q08624 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.26□□□□□ -0.45
Hoxc4Q08624 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm24231-201ENSMUST00000104315 133 ntBASIC12.25□□□□□ -0.45
Hoxc4Q08624 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.25□□□□□ -0.45
Hoxc4Q08624 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.25□□□□□ -0.45
Hoxc4Q08624 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.25□□□□□ -0.45
Hoxc4Q08624 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hoxc4Q08624 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.24□□□□□ -0.45
Hoxc4Q08624 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.24□□□□□ -0.45
Hoxc4Q08624 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.24□□□□□ -0.45
Hoxc4Q08624 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.24□□□□□ -0.45
Hoxc4Q08624 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hoxc4Q08624 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms