Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox4Q06831 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sox4Q06831 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox4Q06831 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.57□□□□□ -0.4
Sox4Q06831 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.57□□□□□ -0.4
Sox4Q06831 Gm14921-201ENSMUST00000118643 908 ntBASIC12.57□□□□□ -0.4
Sox4Q06831 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.57□□□□□ -0.4
Sox4Q06831 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.57□□□□□ -0.4
Sox4Q06831 Gm38158-201ENSMUST00000194617 339 ntBASIC12.57□□□□□ -0.4
Sox4Q06831 Gm38092-201ENSMUST00000195600 653 ntBASIC12.57□□□□□ -0.4
Sox4Q06831 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox4Q06831 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox4Q06831 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox4Q06831 Gm6013-201ENSMUST00000212264 699 ntBASIC12.57□□□□□ -0.4
Sox4Q06831 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox4Q06831 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.57□□□□□ -0.4
Sox4Q06831 Gm7399-201ENSMUST00000032395 858 ntBASIC12.57□□□□□ -0.4
Sox4Q06831 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox4Q06831 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.57□□□□□ -0.4
Sox4Q06831 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Sox4Q06831 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Sox4Q06831 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sox4Q06831 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox4Q06831 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox4Q06831 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sox4Q06831 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sox4Q06831 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox4Q06831 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.56□□□□□ -0.4
Sox4Q06831 Gm11793-201ENSMUST00000120433 981 ntBASIC12.56□□□□□ -0.4
Sox4Q06831 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.56□□□□□ -0.4
Sox4Q06831 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Sox4Q06831 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.56□□□□□ -0.4
Sox4Q06831 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.56□□□□□ -0.4
Sox4Q06831 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Sox4Q06831 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.56□□□□□ -0.4
Sox4Q06831 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.56□□□□□ -0.4
Sox4Q06831 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox4Q06831 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Sox4Q06831 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.56□□□□□ -0.4
Sox4Q06831 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox4Q06831 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Sox4Q06831 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sox4Q06831 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms