Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.91□□□□□ -0.66
Col8a1Q00780 Gm8194-201ENSMUST00000159783 859 ntBASIC10.91□□□□□ -0.66
Col8a1Q00780 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.91□□□□□ -0.66
Col8a1Q00780 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Gm4607-201ENSMUST00000206649 577 ntBASIC10.91□□□□□ -0.66
Col8a1Q00780 Gm45433-201ENSMUST00000209386 247 ntBASIC10.91□□□□□ -0.66
Col8a1Q00780 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.91□□□□□ -0.66
Col8a1Q00780 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.91□□□□□ -0.66
Col8a1Q00780 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col8a1Q00780 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Col8a1Q00780 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.91□□□□□ -0.66
Col8a1Q00780 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC10.91□□□□□ -0.66
Col8a1Q00780 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col8a1Q00780 Gm37737-201ENSMUST00000195013 1638 ntBASIC10.91□□□□□ -0.66
Col8a1Q00780 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Col8a1Q00780 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Col8a1Q00780 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC10.9□□□□□ -0.66
Col8a1Q00780 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.9□□□□□ -0.66
Col8a1Q00780 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Col8a1Q00780 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Gm8285-201ENSMUST00000208293 759 ntBASIC10.9□□□□□ -0.66
Col8a1Q00780 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 CT025551.1-201ENSMUST00000223996 692 ntBASIC10.9□□□□□ -0.66
Col8a1Q00780 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col8a1Q00780 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC10.9□□□□□ -0.66
Col8a1Q00780 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC10.9□□□□□ -0.66
Col8a1Q00780 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Col8a1Q00780 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Col8a1Q00780 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col8a1Q00780 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col8a1Q00780 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Col8a1Q00780 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Col8a1Q00780 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Col8a1Q00780 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a1Q00780 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a1Q00780 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a1Q00780 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a1Q00780 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.89□□□□□ -0.67
Col8a1Q00780 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a1Q00780 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a1Q00780 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a1Q00780 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Col8a1Q00780 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms