Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx2-3P97334 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Nkx2-3P97334 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nkx2-3P97334 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
Nkx2-3P97334 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Nkx2-3P97334 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.95■□□□□ 0.14
Nkx2-3P97334 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Gm9996-201ENSMUST00000070359 913 ntBASIC15.95■□□□□ 0.14
Nkx2-3P97334 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Gm43081-201ENSMUST00000199082 1380 ntBASIC15.95■□□□□ 0.14
Nkx2-3P97334 Gm45342-201ENSMUST00000210903 1363 ntBASIC15.95■□□□□ 0.14
Nkx2-3P97334 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Zkscan3-207ENSMUST00000223831 2101 ntBASIC15.95■□□□□ 0.14
Nkx2-3P97334 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Nkx2-3P97334 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 AY036118-201ENSMUST00000200021 923 ntBASIC15.94■□□□□ 0.14
Nkx2-3P97334 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.94■□□□□ 0.14
Nkx2-3P97334 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Nkx2-3P97334 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Gm12266-201ENSMUST00000120311 962 ntBASIC15.93■□□□□ 0.14
Nkx2-3P97334 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.93■□□□□ 0.14
Nkx2-3P97334 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.93■□□□□ 0.14
Nkx2-3P97334 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.93■□□□□ 0.14
Nkx2-3P97334 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx2-3P97334 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms