Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.66□□□□□ -0.38
Crnkl1P63154 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.66□□□□□ -0.38
Crnkl1P63154 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.66□□□□□ -0.38
Crnkl1P63154 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Crnkl1P63154 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Crnkl1P63154 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.66□□□□□ -0.38
Crnkl1P63154 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Crnkl1P63154 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Crnkl1P63154 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Crnkl1P63154 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Crnkl1P63154 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.65□□□□□ -0.38
Crnkl1P63154 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.65□□□□□ -0.38
Crnkl1P63154 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.65□□□□□ -0.38
Crnkl1P63154 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Crnkl1P63154 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Crnkl1P63154 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.65□□□□□ -0.38
Crnkl1P63154 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Gm14719-201ENSMUST00000121891 340 ntBASIC12.65□□□□□ -0.38
Crnkl1P63154 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.65□□□□□ -0.38
Crnkl1P63154 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.65□□□□□ -0.38
Crnkl1P63154 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.65□□□□□ -0.38
Crnkl1P63154 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.65□□□□□ -0.38
Crnkl1P63154 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.65□□□□□ -0.38
Crnkl1P63154 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.65□□□□□ -0.38
Crnkl1P63154 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Crnkl1P63154 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.65□□□□□ -0.38
Crnkl1P63154 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.65□□□□□ -0.38
Crnkl1P63154 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Crnkl1P63154 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Crnkl1P63154 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Crnkl1P63154 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Crnkl1P63154 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Crnkl1P63154 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.64□□□□□ -0.39
Crnkl1P63154 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Crnkl1P63154 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Gm21470-201ENSMUST00000187680 696 ntBASIC12.64□□□□□ -0.39
Crnkl1P63154 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.64□□□□□ -0.39
Crnkl1P63154 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.64□□□□□ -0.39
Crnkl1P63154 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.64□□□□□ -0.39
Crnkl1P63154 Gm20445-201ENSMUST00000061905 565 ntBASIC12.64□□□□□ -0.39
Crnkl1P63154 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.64□□□□□ -0.39
Crnkl1P63154 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.64□□□□□ -0.39
Crnkl1P63154 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.64□□□□□ -0.39
Crnkl1P63154 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Crnkl1P63154 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms