Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubgcp3P58854 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tubgcp3P58854 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubgcp3P58854 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubgcp3P58854 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.06□□□□□ -0.32
Tubgcp3P58854 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tubgcp3P58854 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tubgcp3P58854 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubgcp3P58854 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tubgcp3P58854 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.05□□□□□ -0.32
Tubgcp3P58854 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.05□□□□□ -0.32
Tubgcp3P58854 Gm13813-201ENSMUST00000120998 787 ntBASIC13.05□□□□□ -0.32
Tubgcp3P58854 Gm12291-201ENSMUST00000121627 311 ntBASIC13.05□□□□□ -0.32
Tubgcp3P58854 Gm16479-201ENSMUST00000121706 932 ntBASIC13.05□□□□□ -0.32
Tubgcp3P58854 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.05□□□□□ -0.32
Tubgcp3P58854 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.05□□□□□ -0.32
Tubgcp3P58854 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.05□□□□□ -0.32
Tubgcp3P58854 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tubgcp3P58854 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.04□□□□□ -0.32
Tubgcp3P58854 Gm22331-201ENSMUST00000158066 136 ntBASIC13.04□□□□□ -0.32
Tubgcp3P58854 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.04□□□□□ -0.32
Tubgcp3P58854 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.04□□□□□ -0.32
Tubgcp3P58854 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Gm7653-201ENSMUST00000214567 508 ntBASIC13.04□□□□□ -0.32
Tubgcp3P58854 Gm5035-201ENSMUST00000215581 927 ntBASIC13.04□□□□□ -0.32
Tubgcp3P58854 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.04□□□□□ -0.32
Tubgcp3P58854 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Tubgcp3P58854 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Tubgcp3P58854 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms