Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Gm9385-201ENSMUST00000117563 472 ntBASIC9.93□□□□□ -0.82
Ctdsp1P58466 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Mir6982-201ENSMUST00000184354 68 ntBASIC9.93□□□□□ -0.82
Ctdsp1P58466 Gm45453-201ENSMUST00000211758 853 ntBASIC9.93□□□□□ -0.82
Ctdsp1P58466 Mir125a-201ENSMUST00000083545 68 ntBASIC9.93□□□□□ -0.82
Ctdsp1P58466 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Ctdsp1P58466 Gm38037-201ENSMUST00000192600 1624 ntBASIC9.93□□□□□ -0.82
Ctdsp1P58466 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC9.92□□□□□ -0.82
Ctdsp1P58466 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 AC126257.2-201ENSMUST00000215507 2300 ntBASIC9.92□□□□□ -0.82
Ctdsp1P58466 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gm13597-201ENSMUST00000121239 375 ntBASIC9.92□□□□□ -0.82
Ctdsp1P58466 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gm18737-201ENSMUST00000173594 937 ntBASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gm10231-201ENSMUST00000181584 441 ntBASIC9.92□□□□□ -0.82
Ctdsp1P58466 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gm10175-202ENSMUST00000208752 441 ntBASIC9.92□□□□□ -0.82
Ctdsp1P58466 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Ctdsp1P58466 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ctdsp1P58466 Gm42934-201ENSMUST00000196920 1345 ntBASIC9.91□□□□□ -0.82
Ctdsp1P58466 Gm42466-201ENSMUST00000202099 1301 ntBASIC9.91□□□□□ -0.82
Ctdsp1P58466 Gm45667-201ENSMUST00000210380 1316 ntBASIC9.91□□□□□ -0.82
Ctdsp1P58466 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms