Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.36□□□□□ -0.43
Lbx1P52955 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.36□□□□□ -0.43
Lbx1P52955 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Lbx1P52955 Acot6-202ENSMUST00000222921 3622 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Lbx1P52955 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lbx1P52955 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lbx1P52955 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.36□□□□□ -0.43
Lbx1P52955 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Lbx1P52955 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Lbx1P52955 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Lbx1P52955 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.35□□□□□ -0.43
Lbx1P52955 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Gm6485-201ENSMUST00000160676 439 ntBASIC12.35□□□□□ -0.43
Lbx1P52955 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lbx1P52955 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.35□□□□□ -0.43
Lbx1P52955 Gm4482-201ENSMUST00000200876 742 ntBASIC12.35□□□□□ -0.43
Lbx1P52955 Gm42657-201ENSMUST00000201746 211 ntBASIC12.35□□□□□ -0.43
Lbx1P52955 Gm19187-201ENSMUST00000206781 892 ntBASIC12.35□□□□□ -0.43
Lbx1P52955 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.35□□□□□ -0.43
Lbx1P52955 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.35□□□□□ -0.43
Lbx1P52955 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lbx1P52955 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.35□□□□□ -0.43
Lbx1P52955 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.35□□□□□ -0.43
Lbx1P52955 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.35□□□□□ -0.43
Lbx1P52955 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lbx1P52955 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
Lbx1P52955 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lbx1P52955 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Lbx1P52955 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lbx1P52955 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Lbx1P52955 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lbx1P52955 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lbx1P52955 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.34□□□□□ -0.43
Lbx1P52955 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Lbx1P52955 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Lbx1P52955 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC12.34□□□□□ -0.43
Lbx1P52955 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.34□□□□□ -0.43
Lbx1P52955 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm24845-201ENSMUST00000158034 109 ntBASIC12.34□□□□□ -0.43
Lbx1P52955 Gm18201-201ENSMUST00000174735 875 ntBASIC12.34□□□□□ -0.43
Lbx1P52955 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lbx1P52955 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm18038-201ENSMUST00000197900 485 ntBASIC12.34□□□□□ -0.43
Lbx1P52955 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm5599-201ENSMUST00000209602 788 ntBASIC12.34□□□□□ -0.43
Lbx1P52955 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.34□□□□□ -0.43
Lbx1P52955 Gm19009-201ENSMUST00000223072 823 ntBASIC12.34□□□□□ -0.43
Lbx1P52955 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms