Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Hnf4aP49698 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Gm12203-201ENSMUST00000118235 598 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 Gm12209-201ENSMUST00000120089 596 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Gm8652-201ENSMUST00000181363 964 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.38□□□□□ -0.43
Hnf4aP49698 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Hnf4aP49698 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Hnf4aP49698 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.37□□□□□ -0.43
Hnf4aP49698 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.37□□□□□ -0.43
Hnf4aP49698 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm14921-201ENSMUST00000118643 908 ntBASIC12.37□□□□□ -0.43
Hnf4aP49698 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm16479-201ENSMUST00000121706 932 ntBASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm27839-201ENSMUST00000184242 106 ntBASIC12.37□□□□□ -0.43
Hnf4aP49698 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.37□□□□□ -0.43
Hnf4aP49698 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Hnf4aP49698 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.37□□□□□ -0.43
Hnf4aP49698 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.37□□□□□ -0.43
Hnf4aP49698 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Hnf4aP49698 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms