Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.07□□□□□ -0.16
Brca1P48754 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.07□□□□□ -0.16
Brca1P48754 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.07□□□□□ -0.16
Brca1P48754 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Brca1P48754 Gm14314-201ENSMUST00000118225 1015 ntBASIC14.07□□□□□ -0.16
Brca1P48754 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.07□□□□□ -0.16
Brca1P48754 Gm5542-201ENSMUST00000195485 1089 ntBASIC14.07□□□□□ -0.16
Brca1P48754 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.07□□□□□ -0.16
Brca1P48754 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.07□□□□□ -0.16
Brca1P48754 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Brca1P48754 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Gm13600-201ENSMUST00000117949 744 ntBASIC14.06□□□□□ -0.16
Brca1P48754 Gm12628-201ENSMUST00000122193 382 ntBASIC14.06□□□□□ -0.16
Brca1P48754 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC14.06□□□□□ -0.16
Brca1P48754 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Gm8100-201ENSMUST00000182906 988 ntBASIC14.06□□□□□ -0.16
Brca1P48754 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Brca1P48754 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC14.06□□□□□ -0.16
Brca1P48754 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.06□□□□□ -0.16
Brca1P48754 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC14.06□□□□□ -0.16
Brca1P48754 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC14.06□□□□□ -0.16
Brca1P48754 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Gm26035-201ENSMUST00000083065 308 ntBASIC14.06□□□□□ -0.16
Brca1P48754 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.06□□□□□ -0.16
Brca1P48754 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Brca1P48754 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Gm12857-201ENSMUST00000117678 592 ntBASIC14.06□□□□□ -0.16
Brca1P48754 Gm11801-201ENSMUST00000117807 746 ntBASIC14.06□□□□□ -0.16
Brca1P48754 Gm11511-201ENSMUST00000118146 540 ntBASIC14.06□□□□□ -0.16
Brca1P48754 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC14.06□□□□□ -0.16
Brca1P48754 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC14.06□□□□□ -0.16
Brca1P48754 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC14.06□□□□□ -0.16
Brca1P48754 Gm28324-201ENSMUST00000187913 264 ntBASIC14.06□□□□□ -0.16
Brca1P48754 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Brca1P48754 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Brca1P48754 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Brca1P48754 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Brca1P48754 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.05□□□□□ -0.16
Brca1P48754 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Brca1P48754 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Gm14724-201ENSMUST00000118400 537 ntBASIC14.05□□□□□ -0.16
Brca1P48754 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.05□□□□□ -0.16
Brca1P48754 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Brca1P48754 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC14.05□□□□□ -0.16
Brca1P48754 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.05□□□□□ -0.16
Brca1P48754 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Brca1P48754 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.05□□□□□ -0.16
Brca1P48754 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Brca1P48754 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Brca1P48754 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Gm7541-201ENSMUST00000118361 535 ntBASIC14.04□□□□□ -0.16
Brca1P48754 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.04□□□□□ -0.16
Brca1P48754 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC14.04□□□□□ -0.16
Brca1P48754 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Brca1P48754 Gm42518-201ENSMUST00000196277 938 ntBASIC14.04□□□□□ -0.16
Brca1P48754 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Brca1P48754 Gm4157-201ENSMUST00000211647 679 ntBASIC14.04□□□□□ -0.16
Brca1P48754 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC14.04□□□□□ -0.16
Brca1P48754 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms