Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 Gm13996-201ENSMUST00000118456 430 ntBASIC12.37□□□□□ -0.43
Sox18P43680 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Gm17208-201ENSMUST00000168388 535 ntBASIC12.37□□□□□ -0.43
Sox18P43680 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Sox18P43680 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Gm14005-208ENSMUST00000223654 681 ntBASIC12.37□□□□□ -0.43
Sox18P43680 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.37□□□□□ -0.43
Sox18P43680 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 AC166491.1-201ENSMUST00000227053 2308 ntBASIC12.37□□□□□ -0.43
Sox18P43680 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Sox18P43680 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox18P43680 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox18P43680 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.36□□□□□ -0.43
Sox18P43680 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.36□□□□□ -0.43
Sox18P43680 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.36□□□□□ -0.43
Sox18P43680 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox18P43680 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.36□□□□□ -0.43
Sox18P43680 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.36□□□□□ -0.43
Sox18P43680 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Gm6407-201ENSMUST00000176468 549 ntBASIC12.36□□□□□ -0.43
Sox18P43680 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox18P43680 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox18P43680 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox18P43680 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.36□□□□□ -0.43
Sox18P43680 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox18P43680 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox18P43680 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox18P43680 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.36□□□□□ -0.43
Sox18P43680 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox18P43680 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
Sox18P43680 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox18P43680 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox18P43680 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Sox18P43680 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.35□□□□□ -0.43
Sox18P43680 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox18P43680 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox18P43680 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Sox18P43680 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Sox18P43680 Gm9062-201ENSMUST00000117712 727 ntBASIC12.35□□□□□ -0.43
Sox18P43680 Gm23699-201ENSMUST00000158835 135 ntBASIC12.35□□□□□ -0.43
Sox18P43680 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Sox18P43680 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.35□□□□□ -0.43
Sox18P43680 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.35□□□□□ -0.43
Sox18P43680 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox18P43680 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms