Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.33□□□□□ -0.44
Tnfsf4P43488 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.33□□□□□ -0.44
Tnfsf4P43488 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.33□□□□□ -0.44
Tnfsf4P43488 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Tnfsf4P43488 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.32□□□□□ -0.44
Tnfsf4P43488 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Gm12859-201ENSMUST00000117834 427 ntBASIC12.32□□□□□ -0.44
Tnfsf4P43488 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Gm2495-201ENSMUST00000191160 466 ntBASIC12.32□□□□□ -0.44
Tnfsf4P43488 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Gm44124-201ENSMUST00000204159 472 ntBASIC12.32□□□□□ -0.44
Tnfsf4P43488 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.32□□□□□ -0.44
Tnfsf4P43488 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Tnfsf4P43488 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.31□□□□□ -0.44
Tnfsf4P43488 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Tnfsf4P43488 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Gm12928-201ENSMUST00000117115 573 ntBASIC12.31□□□□□ -0.44
Tnfsf4P43488 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.31□□□□□ -0.44
Tnfsf4P43488 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.31□□□□□ -0.44
Tnfsf4P43488 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Tnfsf4P43488 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.31□□□□□ -0.44
Tnfsf4P43488 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms