Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.18□□□□□ -0.3
Msh2P43247 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.18□□□□□ -0.3
Msh2P43247 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.18□□□□□ -0.3
Msh2P43247 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.18□□□□□ -0.3
Msh2P43247 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Msh2P43247 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.18□□□□□ -0.3
Msh2P43247 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.18□□□□□ -0.3
Msh2P43247 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.18□□□□□ -0.3
Msh2P43247 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Msh2P43247 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.17□□□□□ -0.3
Msh2P43247 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Msh2P43247 Gm11478-201ENSMUST00000117851 599 ntBASIC13.17□□□□□ -0.3
Msh2P43247 Gm15806-201ENSMUST00000120696 955 ntBASIC13.17□□□□□ -0.3
Msh2P43247 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.17□□□□□ -0.3
Msh2P43247 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.17□□□□□ -0.3
Msh2P43247 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.17□□□□□ -0.3
Msh2P43247 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.17□□□□□ -0.3
Msh2P43247 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Msh2P43247 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Msh2P43247 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Msh2P43247 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Msh2P43247 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Msh2P43247 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.16□□□□□ -0.3
Msh2P43247 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Msh2P43247 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.16□□□□□ -0.3
Msh2P43247 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.16□□□□□ -0.3
Msh2P43247 Gm9002-201ENSMUST00000178437 499 ntBASIC13.16□□□□□ -0.3
Msh2P43247 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.16□□□□□ -0.3
Msh2P43247 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.16□□□□□ -0.3
Msh2P43247 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Msh2P43247 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.16□□□□□ -0.3
Msh2P43247 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.16□□□□□ -0.3
Msh2P43247 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.16□□□□□ -0.3
Msh2P43247 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.16□□□□□ -0.3
Msh2P43247 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Msh2P43247 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Msh2P43247 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Msh2P43247 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.15□□□□□ -0.3
Msh2P43247 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Msh2P43247 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms