Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm18734-201ENSMUST00000172937 808 ntBASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm19459-201ENSMUST00000176240 835 ntBASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm7593-201ENSMUST00000187246 644 ntBASIC11.79□□□□□ -0.52
Sftpa1P35242 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.79□□□□□ -0.52
Sftpa1P35242 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Sftpa1P35242 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.79□□□□□ -0.52
Sftpa1P35242 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Sftpa1P35242 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sftpa1P35242 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Gm11628-201ENSMUST00000117568 171 ntBASIC11.78□□□□□ -0.52
Sftpa1P35242 Gm13813-201ENSMUST00000120998 787 ntBASIC11.78□□□□□ -0.52
Sftpa1P35242 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sftpa1P35242 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.78□□□□□ -0.52
Sftpa1P35242 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.78□□□□□ -0.52
Sftpa1P35242 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.78□□□□□ -0.52
Sftpa1P35242 Gm32999-201ENSMUST00000192693 562 ntBASIC11.78□□□□□ -0.52
Sftpa1P35242 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.78□□□□□ -0.52
Sftpa1P35242 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.78□□□□□ -0.52
Sftpa1P35242 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.78□□□□□ -0.52
Sftpa1P35242 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sftpa1P35242 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.77□□□□□ -0.52
Sftpa1P35242 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.77□□□□□ -0.52
Sftpa1P35242 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sftpa1P35242 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm15131-201ENSMUST00000119124 595 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm13408-201ENSMUST00000119822 798 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm13935-201ENSMUST00000121859 798 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm12208-201ENSMUST00000122004 163 ntBASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.77□□□□□ -0.53
Sftpa1P35242 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.77□□□□□ -0.53
Sftpa1P35242 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Sftpa1P35242 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms