Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.09□□□□□ -0.31
Mmp13P33435 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.09□□□□□ -0.31
Mmp13P33435 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.09□□□□□ -0.31
Mmp13P33435 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.09□□□□□ -0.31
Mmp13P33435 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.09□□□□□ -0.31
Mmp13P33435 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.09□□□□□ -0.31
Mmp13P33435 Gm18473-201ENSMUST00000220543 868 ntBASIC13.09□□□□□ -0.31
Mmp13P33435 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.09□□□□□ -0.31
Mmp13P33435 Itm2b-204ENSMUST00000228637 783 ntBASIC13.09□□□□□ -0.31
Mmp13P33435 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Gm37472-201ENSMUST00000192342 4052 ntBASIC13.09□□□□□ -0.31
Mmp13P33435 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Mmp13P33435 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.09□□□□□ -0.31
Mmp13P33435 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Mmp13P33435 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.09□□□□□ -0.31
Mmp13P33435 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Mmp13P33435 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.08□□□□□ -0.31
Mmp13P33435 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Mmp13P33435 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Mmp13P33435 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Mmp13P33435 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Mmp13P33435 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Mmp13P33435 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.08□□□□□ -0.32
Mmp13P33435 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.08□□□□□ -0.32
Mmp13P33435 Gm6152-201ENSMUST00000151704 340 ntBASIC13.08□□□□□ -0.32
Mmp13P33435 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.08□□□□□ -0.32
Mmp13P33435 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.08□□□□□ -0.32
Mmp13P33435 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.08□□□□□ -0.32
Mmp13P33435 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC13.08□□□□□ -0.32
Mmp13P33435 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.08□□□□□ -0.32
Mmp13P33435 AC110817.1-201ENSMUST00000225706 605 ntBASIC13.08□□□□□ -0.32
Mmp13P33435 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Mmp13P33435 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.08□□□□□ -0.32
Mmp13P33435 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC13.08□□□□□ -0.32
Mmp13P33435 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Mmp13P33435 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Mmp13P33435 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Mmp13P33435 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Mmp13P33435 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Mmp13P33435 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.07□□□□□ -0.32
Mmp13P33435 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.07□□□□□ -0.32
Mmp13P33435 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Gm17150-201ENSMUST00000165577 381 ntBASIC13.07□□□□□ -0.32
Mmp13P33435 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Mmp13P33435 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Mmp13P33435 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Mmp13P33435 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.07□□□□□ -0.32
Mmp13P33435 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Mmp13P33435 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Mmp13P33435 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms