Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Gm9719-201ENSMUST00000162765 543 ntBASIC11.78□□□□□ -0.52
Nedd8P29595 AC153872.1-201ENSMUST00000199539 128 ntBASIC11.78□□□□□ -0.52
Nedd8P29595 Gm18049-201ENSMUST00000208909 581 ntBASIC11.78□□□□□ -0.52
Nedd8P29595 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.78□□□□□ -0.52
Nedd8P29595 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.78□□□□□ -0.52
Nedd8P29595 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.78□□□□□ -0.52
Nedd8P29595 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Nedd8P29595 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nedd8P29595 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nedd8P29595 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nedd8P29595 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Nedd8P29595 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nedd8P29595 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Nedd8P29595 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nedd8P29595 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nedd8P29595 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Nedd8P29595 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC11.77□□□□□ -0.53
Nedd8P29595 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Nedd8P29595 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.77□□□□□ -0.53
Nedd8P29595 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.77□□□□□ -0.53
Nedd8P29595 Gm27390-201ENSMUST00000184516 176 ntBASIC11.77□□□□□ -0.53
Nedd8P29595 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC11.77□□□□□ -0.53
Nedd8P29595 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.77□□□□□ -0.53
Nedd8P29595 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.77□□□□□ -0.53
Nedd8P29595 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Nedd8P29595 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Nedd8P29595 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.77□□□□□ -0.53
Nedd8P29595 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.77□□□□□ -0.53
Nedd8P29595 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Nedd8P29595 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nedd8P29595 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Nedd8P29595 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nedd8P29595 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nedd8P29595 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nedd8P29595 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Gm5566-201ENSMUST00000116118 459 ntBASIC11.76□□□□□ -0.53
Nedd8P29595 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.76□□□□□ -0.53
Nedd8P29595 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC11.76□□□□□ -0.53
Nedd8P29595 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nedd8P29595 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.76□□□□□ -0.53
Nedd8P29595 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nedd8P29595 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nedd8P29595 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.76□□□□□ -0.53
Nedd8P29595 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Nedd8P29595 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Nedd8P29595 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.76□□□□□ -0.53
Nedd8P29595 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.76□□□□□ -0.53
Nedd8P29595 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nedd8P29595 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Nedd8P29595 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Nedd8P29595 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms