Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm43138-201ENSMUST00000199123 708 ntBASIC14.63□□□□□ -0.07
Vcam1P29533 Gm19187-201ENSMUST00000206781 892 ntBASIC14.63□□□□□ -0.07
Vcam1P29533 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.63□□□□□ -0.07
Vcam1P29533 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Vcam1P29533 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcam1P29533 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.62□□□□□ -0.07
Vcam1P29533 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.62□□□□□ -0.07
Vcam1P29533 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Gm24231-201ENSMUST00000104315 133 ntBASIC14.62□□□□□ -0.07
Vcam1P29533 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Vcam1P29533 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.62□□□□□ -0.07
Vcam1P29533 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Vcam1P29533 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.62□□□□□ -0.07
Vcam1P29533 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.62□□□□□ -0.07
Vcam1P29533 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vcam1P29533 Gm9022-201ENSMUST00000182482 992 ntBASIC14.62□□□□□ -0.07
Vcam1P29533 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Vcam1P29533 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.62□□□□□ -0.07
Vcam1P29533 Gm19994-201ENSMUST00000217086 586 ntBASIC14.62□□□□□ -0.07
Vcam1P29533 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.62□□□□□ -0.07
Vcam1P29533 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Vcam1P29533 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.62□□□□□ -0.07
Vcam1P29533 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vcam1P29533 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcam1P29533 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.61□□□□□ -0.07
Vcam1P29533 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vcam1P29533 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.61□□□□□ -0.07
Vcam1P29533 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.61□□□□□ -0.07
Vcam1P29533 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.61□□□□□ -0.07
Vcam1P29533 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vcam1P29533 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.61□□□□□ -0.07
Vcam1P29533 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.61□□□□□ -0.07
Vcam1P29533 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
Vcam1P29533 Gm45433-201ENSMUST00000209386 247 ntBASIC14.61□□□□□ -0.07
Vcam1P29533 Gm19208-201ENSMUST00000213861 912 ntBASIC14.61□□□□□ -0.07
Vcam1P29533 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.61□□□□□ -0.07
Vcam1P29533 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.61□□□□□ -0.07
Vcam1P29533 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Vcam1P29533 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
Vcam1P29533 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.61□□□□□ -0.07
Vcam1P29533 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.61□□□□□ -0.07
Vcam1P29533 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcam1P29533 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms