Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.31□□□□□ -0.12
Col2a1P28481 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.31□□□□□ -0.12
Col2a1P28481 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC14.31□□□□□ -0.12
Col2a1P28481 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.31□□□□□ -0.12
Col2a1P28481 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col2a1P28481 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.31□□□□□ -0.12
Col2a1P28481 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col2a1P28481 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.3□□□□□ -0.12
Col2a1P28481 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.3□□□□□ -0.12
Col2a1P28481 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.3□□□□□ -0.12
Col2a1P28481 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col2a1P28481 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col2a1P28481 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.3□□□□□ -0.12
Col2a1P28481 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.3□□□□□ -0.12
Col2a1P28481 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.3□□□□□ -0.12
Col2a1P28481 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
Col2a1P28481 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.3□□□□□ -0.12
Col2a1P28481 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.3□□□□□ -0.12
Col2a1P28481 Gm44882-201ENSMUST00000205702 802 ntBASIC14.3□□□□□ -0.12
Col2a1P28481 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.3□□□□□ -0.12
Col2a1P28481 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.3□□□□□ -0.12
Col2a1P28481 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col2a1P28481 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.3□□□□□ -0.12
Col2a1P28481 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.3□□□□□ -0.12
Col2a1P28481 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col2a1P28481 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.3□□□□□ -0.12
Col2a1P28481 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.3□□□□□ -0.12
Col2a1P28481 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col2a1P28481 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col2a1P28481 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.29□□□□□ -0.12
Col2a1P28481 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Gm15515-201ENSMUST00000117827 822 ntBASIC14.29□□□□□ -0.12
Col2a1P28481 Gm15711-201ENSMUST00000118889 535 ntBASIC14.29□□□□□ -0.12
Col2a1P28481 Gm14247-201ENSMUST00000120950 237 ntBASIC14.29□□□□□ -0.12
Col2a1P28481 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.29□□□□□ -0.12
Col2a1P28481 Gm9630-201ENSMUST00000178304 885 ntBASIC14.29□□□□□ -0.12
Col2a1P28481 Gm34767-201ENSMUST00000191813 1062 ntBASIC14.29□□□□□ -0.12
Col2a1P28481 Gm43378-201ENSMUST00000199336 582 ntBASIC14.29□□□□□ -0.12
Col2a1P28481 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
Col2a1P28481 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.29□□□□□ -0.12
Col2a1P28481 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.29□□□□□ -0.12
Col2a1P28481 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Gm28719-201ENSMUST00000187779 1757 ntBASIC14.29□□□□□ -0.12
Col2a1P28481 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col2a1P28481 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.29□□□□□ -0.12
Col2a1P28481 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Col2a1P28481 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Col2a1P28481 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Col2a1P28481 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.28□□□□□ -0.12
Col2a1P28481 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col2a1P28481 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Col2a1P28481 Gm11941-201ENSMUST00000119904 610 ntBASIC14.28□□□□□ -0.12
Col2a1P28481 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC14.28□□□□□ -0.12
Col2a1P28481 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC14.28□□□□□ -0.12
Col2a1P28481 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col2a1P28481 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.28□□□□□ -0.12
Col2a1P28481 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col2a1P28481 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.28□□□□□ -0.12
Col2a1P28481 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Col2a1P28481 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms