Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Hmgn1P18608 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.68□□□□□ -0.54
Hmgn1P18608 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Hmgn1P18608 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Hmgn1P18608 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC11.68□□□□□ -0.54
Hmgn1P18608 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.68□□□□□ -0.54
Hmgn1P18608 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hmgn1P18608 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Hmgn1P18608 Gm13616-201ENSMUST00000120600 222 ntBASIC11.68□□□□□ -0.54
Hmgn1P18608 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Hmgn1P18608 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Itm2b-204ENSMUST00000228637 783 ntBASIC11.68□□□□□ -0.54
Hmgn1P18608 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Hmgn1P18608 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Gm13689-201ENSMUST00000119360 685 ntBASIC11.67□□□□□ -0.54
Hmgn1P18608 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Gm24694-201ENSMUST00000180054 110 ntBASIC11.67□□□□□ -0.54
Hmgn1P18608 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Gm27663-201ENSMUST00000184839 110 ntBASIC11.67□□□□□ -0.54
Hmgn1P18608 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.67□□□□□ -0.54
Hmgn1P18608 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.67□□□□□ -0.54
Hmgn1P18608 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Hmgn1P18608 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Hmgn1P18608 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Hmgn1P18608 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.66□□□□□ -0.54
Hmgn1P18608 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms