Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Hoxc9P09633 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hoxc9P09633 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hoxc9P09633 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.45■□□□□ 0.22
Hoxc9P09633 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Hoxc9P09633 Gm24231-201ENSMUST00000104315 133 ntBASIC16.45■□□□□ 0.22
Hoxc9P09633 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.45■□□□□ 0.22
Hoxc9P09633 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC16.45■□□□□ 0.22
Hoxc9P09633 Gm23119-201ENSMUST00000158610 140 ntBASIC16.45■□□□□ 0.22
Hoxc9P09633 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC16.45■□□□□ 0.22
Hoxc9P09633 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC16.45■□□□□ 0.22
Hoxc9P09633 Spcs1-203ENSMUST00000226374 592 ntBASIC16.45■□□□□ 0.22
Hoxc9P09633 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Gm13142-201ENSMUST00000117213 1453 ntBASIC16.45■□□□□ 0.22
Hoxc9P09633 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Hoxc9P09633 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Hoxc9P09633 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hoxc9P09633 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Hoxc9P09633 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC16.44■□□□□ 0.22
Hoxc9P09633 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Hoxc9P09633 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Hoxc9P09633 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Gm15515-201ENSMUST00000117827 822 ntBASIC16.44■□□□□ 0.22
Hoxc9P09633 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC16.44■□□□□ 0.22
Hoxc9P09633 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.44■□□□□ 0.22
Hoxc9P09633 AC154252.2-201ENSMUST00000223593 767 ntBASIC16.44■□□□□ 0.22
Hoxc9P09633 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Hoxc9P09633 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hoxc9P09633 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.44■□□□□ 0.22
Hoxc9P09633 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Hoxc9P09633 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Hoxc9P09633 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.43■□□□□ 0.22
Hoxc9P09633 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Hoxc9P09633 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Hoxc9P09633 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC16.43■□□□□ 0.22
Hoxc9P09633 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.43■□□□□ 0.22
Hoxc9P09633 Gm5369-201ENSMUST00000217499 588 ntBASIC16.43■□□□□ 0.22
Hoxc9P09633 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.43■□□□□ 0.22
Hoxc9P09633 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Hoxc9P09633 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Gm43858-201ENSMUST00000199418 1778 ntBASIC16.43■□□□□ 0.22
Hoxc9P09633 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Hoxc9P09633 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Hoxc9P09633 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC16.42■□□□□ 0.22
Hoxc9P09633 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hoxc9P09633 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Hoxc9P09633 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Gm45342-201ENSMUST00000210903 1363 ntBASIC16.42■□□□□ 0.22
Hoxc9P09633 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Hoxc9P09633 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Hoxc9P09633 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms