Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm30285-201ENSMUST00000214614 422 ntBASIC12.81□□□□□ -0.36
Hoxb3P09026 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.81□□□□□ -0.36
Hoxb3P09026 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxb3P09026 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxb3P09026 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxb3P09026 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxb3P09026 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxb3P09026 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Acot6-202ENSMUST00000222921 3622 ntBASIC12.8□□□□□ -0.36
Hoxb3P09026 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxb3P09026 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.8□□□□□ -0.36
Hoxb3P09026 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Gm14460-201ENSMUST00000121511 639 ntBASIC12.8□□□□□ -0.36
Hoxb3P09026 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Gm23153-201ENSMUST00000175323 313 ntBASIC12.8□□□□□ -0.36
Hoxb3P09026 Gm9358-201ENSMUST00000183067 927 ntBASIC12.8□□□□□ -0.36
Hoxb3P09026 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Hoxb3P09026 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxb3P09026 Gm35960-201ENSMUST00000202712 767 ntBASIC12.8□□□□□ -0.36
Hoxb3P09026 Gm44146-201ENSMUST00000203508 816 ntBASIC12.8□□□□□ -0.36
Hoxb3P09026 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.8□□□□□ -0.36
Hoxb3P09026 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.8□□□□□ -0.36
Hoxb3P09026 Pinx1-201ENSMUST00000022528 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Gm9996-201ENSMUST00000070359 913 ntBASIC12.8□□□□□ -0.36
Hoxb3P09026 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxb3P09026 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxb3P09026 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxb3P09026 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.79□□□□□ -0.36
Hoxb3P09026 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Hoxb3P09026 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxb3P09026 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hoxb3P09026 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxb3P09026 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Hoxb3P09026 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxb3P09026 Gm37028-201ENSMUST00000194276 107 ntBASIC12.79□□□□□ -0.36
Hoxb3P09026 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxb3P09026 AC164087.2-201ENSMUST00000216206 1072 ntBASIC12.79□□□□□ -0.36
Hoxb3P09026 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.79□□□□□ -0.36
Hoxb3P09026 AC129323.1-201ENSMUST00000216733 470 ntBASIC12.79□□□□□ -0.36
Hoxb3P09026 Ntng1-201ENSMUST00000051253 327 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms