Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P04940 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P04940 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.35□□□□□ -0.75
P04940 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.35□□□□□ -0.75
P04940 Gm13492-201ENSMUST00000119772 665 ntBASIC10.35□□□□□ -0.75
P04940 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.35□□□□□ -0.75
P04940 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
P04940 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
P04940 Gm8602-201ENSMUST00000184045 607 ntBASIC10.35□□□□□ -0.75
P04940 Gm7063-201ENSMUST00000186840 981 ntBASIC10.35□□□□□ -0.75
P04940 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Gm44124-201ENSMUST00000204159 472 ntBASIC10.35□□□□□ -0.75
P04940 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.35□□□□□ -0.75
P04940 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.35□□□□□ -0.75
P04940 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.35□□□□□ -0.75
P04940 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
P04940 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P04940 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
P04940 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.35□□□□□ -0.75
P04940 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P04940 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
P04940 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
P04940 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P04940 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.34□□□□□ -0.75
P04940 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.34□□□□□ -0.75
P04940 Gm12384-201ENSMUST00000119228 919 ntBASIC10.34□□□□□ -0.75
P04940 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
P04940 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC10.34□□□□□ -0.75
P04940 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.34□□□□□ -0.75
P04940 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC10.34□□□□□ -0.75
P04940 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P04940 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC10.34□□□□□ -0.75
P04940 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC10.34□□□□□ -0.75
P04940 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.34□□□□□ -0.75
P04940 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.34□□□□□ -0.75
P04940 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.34□□□□□ -0.75
P04940 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
P04940 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
P04940 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.34□□□□□ -0.75
P04940 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.34□□□□□ -0.75
P04940 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.34□□□□□ -0.75
P04940 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
P04940 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.34□□□□□ -0.75
P04940 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.34□□□□□ -0.75
P04940 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
P04940 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04940 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04940 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
P04940 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04940 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
P04940 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04940 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
P04940 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
P04940 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
P04940 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.33□□□□□ -0.76
P04940 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
P04940 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.33□□□□□ -0.76
P04940 Gm11964-201ENSMUST00000120982 444 ntBASIC10.33□□□□□ -0.76
P04940 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC10.33□□□□□ -0.76
P04940 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms