Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gm5616-201ENSMUST00000165252 384 ntBASIC13.08□□□□□ -0.32
P01878 Gm8741-201ENSMUST00000174736 384 ntBASIC13.08□□□□□ -0.32
P01878 Gm9022-201ENSMUST00000182482 992 ntBASIC13.08□□□□□ -0.32
P01878 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.08□□□□□ -0.32
P01878 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P01878 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.08□□□□□ -0.32
P01878 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
P01878 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.08□□□□□ -0.32
P01878 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01878 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.07□□□□□ -0.32
P01878 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.07□□□□□ -0.32
P01878 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Grk6-205ENSMUST00000224653 2976 ntBASIC13.07□□□□□ -0.32
P01878 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.07□□□□□ -0.32
P01878 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
P01878 Gm24231-201ENSMUST00000104315 133 ntBASIC13.07□□□□□ -0.32
P01878 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Gm11331-201ENSMUST00000119764 288 ntBASIC13.07□□□□□ -0.32
P01878 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.07□□□□□ -0.32
P01878 Gm42997-202ENSMUST00000200321 985 ntBASIC13.07□□□□□ -0.32
P01878 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.07□□□□□ -0.32
P01878 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.07□□□□□ -0.32
P01878 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.07□□□□□ -0.32
P01878 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.07□□□□□ -0.32
P01878 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
P01878 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.07□□□□□ -0.32
P01878 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
P01878 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
P01878 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
P01878 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P01878 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P01878 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
P01878 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.06□□□□□ -0.32
P01878 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
P01878 Gm9230-201ENSMUST00000188228 532 ntBASIC13.06□□□□□ -0.32
P01878 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
P01878 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
P01878 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
P01878 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Acot6-202ENSMUST00000222921 3622 ntBASIC13.06□□□□□ -0.32
P01878 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
P01878 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01878 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
P01878 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
P01878 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01878 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.05□□□□□ -0.32
P01878 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
P01878 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms