Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
TcraP01849 Gm45532-201ENSMUST00000210342 3620 ntBASIC9.34□□□□□ -0.91
TcraP01849 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.34□□□□□ -0.91
TcraP01849 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
TcraP01849 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
TcraP01849 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
TcraP01849 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Daam2-202ENSMUST00000224595 1926 ntBASIC9.33□□□□□ -0.92
TcraP01849 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.33□□□□□ -0.92
TcraP01849 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.33□□□□□ -0.92
TcraP01849 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
TcraP01849 Gm27702-201ENSMUST00000184512 56 ntBASIC9.33□□□□□ -0.92
TcraP01849 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC9.33□□□□□ -0.92
TcraP01849 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Gm5312-201ENSMUST00000203728 547 ntBASIC9.33□□□□□ -0.92
TcraP01849 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 AC121804.3-201ENSMUST00000223420 295 ntBASIC9.33□□□□□ -0.92
TcraP01849 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
TcraP01849 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Gm36970-201ENSMUST00000193688 1859 ntBASIC9.33□□□□□ -0.92
TcraP01849 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
TcraP01849 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
TcraP01849 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
TcraP01849 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
TcraP01849 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC9.32□□□□□ -0.92
TcraP01849 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
TcraP01849 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC9.32□□□□□ -0.92
TcraP01849 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.32□□□□□ -0.92
TcraP01849 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
TcraP01849 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC9.32□□□□□ -0.92
TcraP01849 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Gm24543-201ENSMUST00000103867 82 ntBASIC9.32□□□□□ -0.92
TcraP01849 Gm5566-201ENSMUST00000116118 459 ntBASIC9.32□□□□□ -0.92
TcraP01849 Gm11557-201ENSMUST00000120200 1008 ntBASIC9.32□□□□□ -0.92
TcraP01849 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
TcraP01849 Gm8927-201ENSMUST00000181978 981 ntBASIC9.32□□□□□ -0.92
TcraP01849 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC9.32□□□□□ -0.92
TcraP01849 Gm18766-201ENSMUST00000189811 808 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms